https://csmiguel.r-universe.devRecent package updates in csmiguelR-universehttps://github.com/csmiguel.pnghttps://csmiguel.r-universe.devFri, 15 May 2026 10:59:16 GMTmiguelcamachosanchez@gmail.com (Miguel Camacho)Variant determination and genotyping from high throughput sequences from multilocus amplicon libraries, typically sequenced in Illumina MiSeq or similar. It provides a set of core functions for the central steps: demultiplex by locus, truncate reads, variant calling, and genotype calling. Additionally, it provides a set of functions for diagnosis and estimation of best running parameters and multiple extensions for genotype/variants manipulation and reformatting. Output variants and genotypes are output in 'tidy' format, thus facilitating reformatting, manipulation and potential connection to other R packages.https://github.com/r-universe/csmiguel/actions/runs/29309740413Fri, 15 May 2026 10:59:16 GMTtidyGenR0.1.8successhttps://csmiguel.r-universe.devhttps://github.com/csmiguel/tidygenrtidyGenR-intro.RmdtidyGenR-intro.htmlIntroduction to tidyGenR2025-04-06 15:54:482026-02-13 11:32:45tidyGenR-optimization.RmdtidyGenR-optimization.htmlOptimization of variant calling2026-02-09 18:48:312026-02-09 18:48:31